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Graphics and Supercomputing

Research by the centre using dynamical systems to model the brain requires a lot of computational resources. Experiments are constructed to explore the parameter space of the dynamical systems that have been modelled. Sophisticated presentation techniques are then used to show the results of these experiments in both static and dynamic forms.

The experiments and graphics techniques are performed with the assistance and resources of the Swinburne Centre for Astrophysics and Supercomputing which is hosted by the Faculty of Information and Communication Technologies at Swinburne.

Below we present some of the images and movies that are the result of this interesting work. For further information please contact either Dr David Liley or Mathew Dafilis. There is also a list of publications that present some of this work.

Movie: Simulation of continuous neural field equations

[pnt_gr.mov ~33.4MB, 640x480, plays for 2:13, 2000 frames]
Here we can see a one dimensional array of neurons initialised to random conditions that evolve over time to exhibit organised (or "wave" like) behaviour. Height (vertical axes) represents activity while colour represents the gradient or difference in activity between neighbouring neurons.

Movie: Variation of a Theme

[rpnt_gr.mov ~27.5MB, 640x480, plays for 2:13, 2344 frames]
This is a radial presentation of the same neural field equation simulation data. Colour still represents the gradient between points, however activity is represented as a radial distance from the centre of the screen (rather than just vertical). Provides an interesting perspective of activity.

Movie: Simulated grid of neuron activity

[dtl_3s.mov ~11.2MB, 300x225, plays for 1:36]
80 by 80 discrete array of neurons where the height and colour of the array represents neuron activity (firing rate). It is interesting to note that the system starts from a random initialisation of conditions and over time begins to display strong self-organised and propogating activity.

Image: Chaotic attractor system

[attractor.gif, ~50KB, single image, jpeg format]
This image is a 2D rendering of a three dimensional representation of a chaotic attractor system that has been found during exploration of the models parameter space. Many calculations had to be performed to determine each point of this system, and the collection of points is shown here as a series (or path). Colour represents the amount of transition that occurs between each point in the series (similar to "speed" if you were travelling along the path).

Movie: Changing attractor forms by parameter variation

[attr_seq.mov, ~31MB, 500x500, plays for 0:33]
This movie shows us the effect that changing one of the system parameters has on the form of the chaotic attractor that results. As you can see from the movie, this provides a very interesting representation of the effect changing a parameter has on such a complex system. A feature of interest are the representations of "limit cycles" where we can see the image forms a solid continuous band.

Image: Complexity

[hlc28.tri_1.jpg, ~129KB, 1000x1000 pixels]
This image illustrates the complicated nature of the behaviour of a mathematical model of brain electrical activity developed by the researchers, and is an example of a "fat fractal". The colours give an indication of how this complexity varies when input to the brain changes.